Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col9a1Q05722 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a1Q05722 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a1Q05722 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a1Q05722 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col9a1Q05722 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.31□□□□□ -0.28
Col9a1Q05722 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a1Q05722 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Col9a1Q05722 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a1Q05722 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col9a1Q05722 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Col9a1Q05722 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a1Q05722 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col9a1Q05722 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col9a1Q05722 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.3□□□□□ -0.28
Col9a1Q05722 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.3□□□□□ -0.28
Col9a1Q05722 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col9a1Q05722 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Col9a1Q05722 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.3□□□□□ -0.28
Col9a1Q05722 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Gm8927-201ENSMUST00000181978 981 ntBASIC13.3□□□□□ -0.28
Col9a1Q05722 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.3□□□□□ -0.28
Col9a1Q05722 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.3□□□□□ -0.28
Col9a1Q05722 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Gm45550-201ENSMUST00000209380 946 ntBASIC13.3□□□□□ -0.28
Col9a1Q05722 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC13.3□□□□□ -0.28
Col9a1Q05722 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col9a1Q05722 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col9a1Q05722 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col9a1Q05722 AC151904.4-201ENSMUST00000219868 1319 ntBASIC13.3□□□□□ -0.28
Col9a1Q05722 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col9a1Q05722 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col9a1Q05722 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.3□□□□□ -0.28
Col9a1Q05722 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a1Q05722 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Col9a1Q05722 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col9a1Q05722 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
Col9a1Q05722 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col9a1Q05722 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col9a1Q05722 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Mir181d-201ENSMUST00000102383 72 ntBASIC13.29□□□□□ -0.28
Col9a1Q05722 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col9a1Q05722 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.29□□□□□ -0.28
Col9a1Q05722 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.29□□□□□ -0.28
Col9a1Q05722 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC13.29□□□□□ -0.28
Col9a1Q05722 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Col9a1Q05722 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC13.29□□□□□ -0.28
Col9a1Q05722 Gm43916-201ENSMUST00000205062 967 ntBASIC13.29□□□□□ -0.28
Col9a1Q05722 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.29□□□□□ -0.28
Col9a1Q05722 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col9a1Q05722 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.29□□□□□ -0.28
Col9a1Q05722 Gm18027-201ENSMUST00000218947 619 ntBASIC13.29□□□□□ -0.28
Col9a1Q05722 AC154441.1-201ENSMUST00000223653 1006 ntBASIC13.29□□□□□ -0.28
Col9a1Q05722 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.29□□□□□ -0.28
Col9a1Q05722 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col9a1Q05722 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms