Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Xrn1P97789 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Xrn1P97789 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Xrn1P97789 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Xrn1P97789 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
Xrn1P97789 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC18.77■□□□□ 0.59
Xrn1P97789 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC18.77■□□□□ 0.59
Xrn1P97789 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC18.77■□□□□ 0.59
Xrn1P97789 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Xrn1P97789 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Xrn1P97789 Gm13996-201ENSMUST00000118456 430 ntBASIC18.76■□□□□ 0.59
Xrn1P97789 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Gm27552-201ENSMUST00000183351 62 ntBASIC18.76■□□□□ 0.59
Xrn1P97789 Gm27844-201ENSMUST00000183613 62 ntBASIC18.76■□□□□ 0.59
Xrn1P97789 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC18.76■□□□□ 0.59
Xrn1P97789 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC18.76■□□□□ 0.59
Xrn1P97789 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Xrn1P97789 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Xrn1P97789 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Xrn1P97789 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Gm13296-201ENSMUST00000117854 997 ntBASIC18.75■□□□□ 0.59
Xrn1P97789 Gm12058-201ENSMUST00000118614 437 ntBASIC18.75■□□□□ 0.59
Xrn1P97789 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC18.75■□□□□ 0.59
Xrn1P97789 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Xrn1P97789 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Gm5051-201ENSMUST00000204085 485 ntBASIC18.75■□□□□ 0.59
Xrn1P97789 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Xrn1P97789 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Xrn1P97789 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xrn1P97789 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC18.75■□□□□ 0.59
Xrn1P97789 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC18.74■□□□□ 0.59
Xrn1P97789 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC18.74■□□□□ 0.59
Xrn1P97789 Gm10051-201ENSMUST00000145209 414 ntBASIC18.74■□□□□ 0.59
Xrn1P97789 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC18.74■□□□□ 0.59
Xrn1P97789 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC18.74■□□□□ 0.59
Xrn1P97789 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Xrn1P97789 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Gm6992-201ENSMUST00000217973 1607 ntBASIC18.74■□□□□ 0.59
Xrn1P97789 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Xrn1P97789 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC18.74■□□□□ 0.59
Xrn1P97789 Gm7207-201ENSMUST00000211575 1067 ntBASIC18.74■□□□□ 0.59
Xrn1P97789 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xrn1P97789 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Xrn1P97789 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Xrn1P97789 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Xrn1P97789 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Xrn1P97789 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Xrn1P97789 Gm44094-201ENSMUST00000204703 2030 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms