Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.77□□□□□ -0.21
Thumpd3P97770 Gm5186-201ENSMUST00000218781 920 ntBASIC13.77□□□□□ -0.21
Thumpd3P97770 Gm9063-201ENSMUST00000223299 582 ntBASIC13.77□□□□□ -0.21
Thumpd3P97770 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.77□□□□□ -0.21
Thumpd3P97770 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Thumpd3P97770 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Thumpd3P97770 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Thumpd3P97770 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Thumpd3P97770 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Thumpd3P97770 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Thumpd3P97770 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Thumpd3P97770 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Thumpd3P97770 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Thumpd3P97770 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
Thumpd3P97770 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.76□□□□□ -0.21
Thumpd3P97770 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.76□□□□□ -0.21
Thumpd3P97770 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Thumpd3P97770 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.76□□□□□ -0.21
Thumpd3P97770 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Thumpd3P97770 Gm5566-201ENSMUST00000116118 459 ntBASIC13.76□□□□□ -0.21
Thumpd3P97770 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.76□□□□□ -0.21
Thumpd3P97770 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.76□□□□□ -0.21
Thumpd3P97770 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.76□□□□□ -0.21
Thumpd3P97770 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Thumpd3P97770 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Thumpd3P97770 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Thumpd3P97770 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Thumpd3P97770 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Thumpd3P97770 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.76□□□□□ -0.21
Thumpd3P97770 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd3P97770 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Thumpd3P97770 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.75□□□□□ -0.21
Thumpd3P97770 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.75□□□□□ -0.21
Thumpd3P97770 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Thumpd3P97770 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Thumpd3P97770 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.75□□□□□ -0.21
Thumpd3P97770 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Gm2423-201ENSMUST00000074863 733 ntBASIC13.75□□□□□ -0.21
Thumpd3P97770 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.75□□□□□ -0.21
Thumpd3P97770 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd3P97770 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms