Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.33□□□□□ -0.6
Npas1P97459 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.33□□□□□ -0.6
Npas1P97459 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Map1b-203ENSMUST00000223725 2669 ntBASIC11.33□□□□□ -0.6
Npas1P97459 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Npas1P97459 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.33□□□□□ -0.6
Npas1P97459 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Npas1P97459 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Npas1P97459 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.32□□□□□ -0.6
Npas1P97459 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.32□□□□□ -0.6
Npas1P97459 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Npas1P97459 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.32□□□□□ -0.6
Npas1P97459 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.32□□□□□ -0.6
Npas1P97459 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.32□□□□□ -0.6
Npas1P97459 Gm28659-201ENSMUST00000188013 759 ntBASIC11.32□□□□□ -0.6
Npas1P97459 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.32□□□□□ -0.6
Npas1P97459 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.32□□□□□ -0.6
Npas1P97459 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.32□□□□□ -0.6
Npas1P97459 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.32□□□□□ -0.6
Npas1P97459 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.32□□□□□ -0.6
Npas1P97459 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Npas1P97459 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Npas1P97459 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.31□□□□□ -0.6
Npas1P97459 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Npas1P97459 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Npas1P97459 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Npas1P97459 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Npas1P97459 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.31□□□□□ -0.6
Npas1P97459 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.31□□□□□ -0.6
Npas1P97459 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.31□□□□□ -0.6
Npas1P97459 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.31□□□□□ -0.6
Npas1P97459 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Npas1P97459 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Npas1P97459 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
Npas1P97459 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Npas1P97459 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms