Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gbx1P82976 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gbx1P82976 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gbx1P82976 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Gbx1P82976 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gbx1P82976 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Gbx1P82976 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gbx1P82976 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gbx1P82976 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Gbx1P82976 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gbx1P82976 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gbx1P82976 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gbx1P82976 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gbx1P82976 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Gbx1P82976 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gbx1P82976 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Gbx1P82976 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Gbx1P82976 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Gbx1P82976 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Gbx1P82976 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Gbx1P82976 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.7□□□□□ -0.38
Gbx1P82976 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.7□□□□□ -0.38
Gbx1P82976 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.7□□□□□ -0.38
Gbx1P82976 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.7□□□□□ -0.38
Gbx1P82976 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.7□□□□□ -0.38
Gbx1P82976 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.7□□□□□ -0.38
Gbx1P82976 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Gbx1P82976 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.7□□□□□ -0.38
Gbx1P82976 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.7□□□□□ -0.38
Gbx1P82976 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.7□□□□□ -0.38
Gbx1P82976 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.7□□□□□ -0.38
Gbx1P82976 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Gbx1P82976 Gm5425-201ENSMUST00000214125 459 ntBASIC12.7□□□□□ -0.38
Gbx1P82976 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.7□□□□□ -0.38
Gbx1P82976 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Gbx1P82976 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.7□□□□□ -0.38
Gbx1P82976 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Gbx1P82976 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Gbx1P82976 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.7□□□□□ -0.38
Gbx1P82976 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gbx1P82976 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Gbx1P82976 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.69□□□□□ -0.38
Gbx1P82976 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.69□□□□□ -0.38
Gbx1P82976 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.69□□□□□ -0.38
Gbx1P82976 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.69□□□□□ -0.38
Gbx1P82976 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.69□□□□□ -0.38
Gbx1P82976 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.69□□□□□ -0.38
Gbx1P82976 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Gbx1P82976 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.69□□□□□ -0.38
Gbx1P82976 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.69□□□□□ -0.38
Gbx1P82976 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Gbx1P82976 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gbx1P82976 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms