Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
SgcaP82350 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.33□□□□□ -0.6
SgcaP82350 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SgcaP82350 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.32□□□□□ -0.6
SgcaP82350 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SgcaP82350 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
SgcaP82350 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.32□□□□□ -0.6
SgcaP82350 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Gm5177-201ENSMUST00000183092 997 ntBASIC11.32□□□□□ -0.6
SgcaP82350 Gm44608-201ENSMUST00000206827 855 ntBASIC11.32□□□□□ -0.6
SgcaP82350 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.32□□□□□ -0.6
SgcaP82350 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.32□□□□□ -0.6
SgcaP82350 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.32□□□□□ -0.6
SgcaP82350 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SgcaP82350 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcaP82350 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
SgcaP82350 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SgcaP82350 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.31□□□□□ -0.6
SgcaP82350 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.31□□□□□ -0.6
SgcaP82350 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Gm15957-201ENSMUST00000118893 974 ntBASIC11.31□□□□□ -0.6
SgcaP82350 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.31□□□□□ -0.6
SgcaP82350 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Gm27628-201ENSMUST00000184911 107 ntBASIC11.31□□□□□ -0.6
SgcaP82350 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.31□□□□□ -0.6
SgcaP82350 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.31□□□□□ -0.6
SgcaP82350 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SgcaP82350 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
SgcaP82350 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SgcaP82350 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SgcaP82350 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.31□□□□□ -0.6
SgcaP82350 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcaP82350 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.3□□□□□ -0.6
SgcaP82350 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
SgcaP82350 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.3□□□□□ -0.6
SgcaP82350 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SgcaP82350 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SgcaP82350 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SgcaP82350 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SgcaP82350 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms