Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.95□□□□□ -0.18
Smad1P70340 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smad1P70340 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.95□□□□□ -0.18
Smad1P70340 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.94□□□□□ -0.18
Smad1P70340 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Smad1P70340 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Smad1P70340 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.94□□□□□ -0.18
Smad1P70340 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Smad1P70340 Gm13829-201ENSMUST00000119600 138 ntBASIC13.94□□□□□ -0.18
Smad1P70340 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.94□□□□□ -0.18
Smad1P70340 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.94□□□□□ -0.18
Smad1P70340 Gm12091-201ENSMUST00000146791 830 ntBASIC13.94□□□□□ -0.18
Smad1P70340 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.94□□□□□ -0.18
Smad1P70340 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Gm8602-201ENSMUST00000184045 607 ntBASIC13.94□□□□□ -0.18
Smad1P70340 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.94□□□□□ -0.18
Smad1P70340 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.94□□□□□ -0.18
Smad1P70340 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.94□□□□□ -0.18
Smad1P70340 Gm15823-201ENSMUST00000064305 670 ntBASIC13.94□□□□□ -0.18
Smad1P70340 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Smad1P70340 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smad1P70340 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Smad1P70340 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.93□□□□□ -0.18
Smad1P70340 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smad1P70340 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.93□□□□□ -0.18
Smad1P70340 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.93□□□□□ -0.18
Smad1P70340 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.93□□□□□ -0.18
Smad1P70340 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Smad1P70340 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Smad1P70340 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.93□□□□□ -0.18
Smad1P70340 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.93□□□□□ -0.18
Smad1P70340 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.93□□□□□ -0.18
Smad1P70340 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.93□□□□□ -0.18
Smad1P70340 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Smad1P70340 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.93□□□□□ -0.18
Smad1P70340 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Gm3436-201ENSMUST00000179930 840 ntBASIC13.93□□□□□ -0.18
Smad1P70340 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.93□□□□□ -0.18
Smad1P70340 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Smad1P70340 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.93□□□□□ -0.18
Smad1P70340 Gm42612-201ENSMUST00000197986 623 ntBASIC13.93□□□□□ -0.18
Smad1P70340 Gm43170-201ENSMUST00000199827 612 ntBASIC13.93□□□□□ -0.18
Smad1P70340 Gm43703-201ENSMUST00000200523 763 ntBASIC13.93□□□□□ -0.18
Smad1P70340 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.93□□□□□ -0.18
Smad1P70340 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.93□□□□□ -0.18
Smad1P70340 Gm46209-201ENSMUST00000217912 553 ntBASIC13.93□□□□□ -0.18
Smad1P70340 Gm16476-201ENSMUST00000221544 139 ntBASIC13.93□□□□□ -0.18
Smad1P70340 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.93□□□□□ -0.18
Smad1P70340 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.93□□□□□ -0.18
Smad1P70340 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.93□□□□□ -0.18
Smad1P70340 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.93□□□□□ -0.18
Smad1P70340 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms