Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cux2P70298 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC21.65■■□□□ 1.06
Cux2P70298 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cux2P70298 Gm15515-201ENSMUST00000117827 822 ntBASIC21.64■■□□□ 1.06
Cux2P70298 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC21.64■■□□□ 1.06
Cux2P70298 Ighv8-10-201ENSMUST00000199579 358 ntBASIC21.64■■□□□ 1.06
Cux2P70298 CT025551.1-201ENSMUST00000223996 692 ntBASIC21.64■■□□□ 1.06
Cux2P70298 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cux2P70298 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cux2P70298 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cux2P70298 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cux2P70298 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cux2P70298 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cux2P70298 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cux2P70298 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Cux2P70298 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cux2P70298 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cux2P70298 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC21.64■■□□□ 1.05
Cux2P70298 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cux2P70298 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC21.64■■□□□ 1.05
Cux2P70298 Gm16397-201ENSMUST00000122201 494 ntBASIC21.63■■□□□ 1.05
Cux2P70298 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux2P70298 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC21.63■■□□□ 1.05
Cux2P70298 Gm17391-201ENSMUST00000171036 126 ntBASIC21.63■■□□□ 1.05
Cux2P70298 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC21.63■■□□□ 1.05
Cux2P70298 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC21.63■■□□□ 1.05
Cux2P70298 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC21.63■■□□□ 1.05
Cux2P70298 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC21.63■■□□□ 1.05
Cux2P70298 Aprt-ps-201ENSMUST00000212311 505 ntBASIC21.63■■□□□ 1.05
Cux2P70298 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
Cux2P70298 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
Cux2P70298 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux2P70298 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux2P70298 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux2P70298 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cux2P70298 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC21.63■■□□□ 1.05
Cux2P70298 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux2P70298 Gm43273-201ENSMUST00000199649 2594 ntBASIC21.63■■□□□ 1.05
Cux2P70298 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cux2P70298 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cux2P70298 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cux2P70298 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux2P70298 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cux2P70298 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.63■■□□□ 1.05
Cux2P70298 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC21.63■■□□□ 1.05
Cux2P70298 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC21.63■■□□□ 1.05
Cux2P70298 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cux2P70298 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Cux2P70298 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC21.63■■□□□ 1.05
Cux2P70298 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC21.63■■□□□ 1.05
Cux2P70298 Gm19187-201ENSMUST00000206781 892 ntBASIC21.63■■□□□ 1.05
Cux2P70298 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC21.63■■□□□ 1.05
Cux2P70298 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Cux2P70298 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
Cux2P70298 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux2P70298 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux2P70298 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC21.62■■□□□ 1.05
Cux2P70298 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Gm6506-201ENSMUST00000119775 1136 ntBASIC21.62■■□□□ 1.05
Cux2P70298 Gm15432-201ENSMUST00000121106 195 ntBASIC21.62■■□□□ 1.05
Cux2P70298 Gm11675-201ENSMUST00000121873 832 ntBASIC21.62■■□□□ 1.05
Cux2P70298 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC21.62■■□□□ 1.05
Cux2P70298 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC21.62■■□□□ 1.05
Cux2P70298 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Cux2P70298 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC21.62■■□□□ 1.05
Cux2P70298 AC166344.1-202ENSMUST00000224139 234 ntBASIC21.62■■□□□ 1.05
Cux2P70298 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cux2P70298 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux2P70298 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux2P70298 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC21.61■■□□□ 1.05
Cux2P70298 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux2P70298 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux2P70298 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux2P70298 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Cux2P70298 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux2P70298 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC21.61■■□□□ 1.05
Cux2P70298 Gm12029-201ENSMUST00000120073 832 ntBASIC21.61■■□□□ 1.05
Cux2P70298 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC21.61■■□□□ 1.05
Cux2P70298 Gm5778-201ENSMUST00000171003 1072 ntBASIC21.61■■□□□ 1.05
Cux2P70298 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC21.61■■□□□ 1.05
Cux2P70298 Gm9061-201ENSMUST00000182707 1006 ntBASIC21.61■■□□□ 1.05
Cux2P70298 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux2P70298 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms