Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Crnkl1P63154 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.37□□□□□ -0.27
Crnkl1P63154 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.37□□□□□ -0.27
Crnkl1P63154 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.37□□□□□ -0.27
Crnkl1P63154 Gm10275-202ENSMUST00000168697 495 ntBASIC13.37□□□□□ -0.27
Crnkl1P63154 Gm2445-201ENSMUST00000182798 989 ntBASIC13.37□□□□□ -0.27
Crnkl1P63154 Gm45612-201ENSMUST00000211320 160 ntBASIC13.37□□□□□ -0.27
Crnkl1P63154 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.37□□□□□ -0.27
Crnkl1P63154 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Crnkl1P63154 Gm10275-201ENSMUST00000092620 635 ntBASIC13.37□□□□□ -0.27
Crnkl1P63154 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Crnkl1P63154 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Crnkl1P63154 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.36□□□□□ -0.27
Crnkl1P63154 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Crnkl1P63154 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.36□□□□□ -0.27
Crnkl1P63154 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.36□□□□□ -0.27
Crnkl1P63154 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.36□□□□□ -0.27
Crnkl1P63154 Rprl2-201ENSMUST00000157150 290 ntBASIC13.36□□□□□ -0.27
Crnkl1P63154 Gm26308-201ENSMUST00000157768 69 ntBASIC13.36□□□□□ -0.27
Crnkl1P63154 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.36□□□□□ -0.27
Crnkl1P63154 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Crnkl1P63154 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Crnkl1P63154 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.36□□□□□ -0.27
Crnkl1P63154 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Crnkl1P63154 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.36□□□□□ -0.27
Crnkl1P63154 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crnkl1P63154 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.35□□□□□ -0.27
Crnkl1P63154 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Crnkl1P63154 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.35□□□□□ -0.27
Crnkl1P63154 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Crnkl1P63154 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Gm23935-201ENSMUST00000102303 57 ntBASIC13.35□□□□□ -0.27
Crnkl1P63154 Gm24270-201ENSMUST00000102326 57 ntBASIC13.35□□□□□ -0.27
Crnkl1P63154 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Gm24245-201ENSMUST00000157318 57 ntBASIC13.35□□□□□ -0.27
Crnkl1P63154 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
Crnkl1P63154 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.35□□□□□ -0.27
Crnkl1P63154 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.35□□□□□ -0.27
Crnkl1P63154 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.35□□□□□ -0.27
Crnkl1P63154 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Crnkl1P63154 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms