Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Gm2272-201ENSMUST00000194903 582 ntBASIC12.28□□□□□ -0.44
Lsm3P62311 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.28□□□□□ -0.44
Lsm3P62311 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lsm3P62311 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lsm3P62311 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Lsm3P62311 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lsm3P62311 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm3P62311 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm3P62311 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm3P62311 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm3P62311 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm3P62311 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm3P62311 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm3P62311 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm3P62311 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Lsm3P62311 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lsm3P62311 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm3P62311 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Lsm3P62311 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.26□□□□□ -0.45
Lsm3P62311 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.26□□□□□ -0.45
Lsm3P62311 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Lsm3P62311 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.26□□□□□ -0.45
Lsm3P62311 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lsm3P62311 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.26□□□□□ -0.45
Lsm3P62311 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.26□□□□□ -0.45
Lsm3P62311 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.26□□□□□ -0.45
Lsm3P62311 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lsm3P62311 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lsm3P62311 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lsm3P62311 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.26□□□□□ -0.45
Lsm3P62311 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lsm3P62311 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.26□□□□□ -0.45
Lsm3P62311 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.26□□□□□ -0.45
Lsm3P62311 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lsm3P62311 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.26□□□□□ -0.45
Lsm3P62311 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lsm3P62311 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.26□□□□□ -0.45
Lsm3P62311 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Lsm3P62311 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.26□□□□□ -0.45
Lsm3P62311 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Lsm3P62311 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm3P62311 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms