Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sec61a1P61620 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.93□□□□□ -0.5
Sec61a1P61620 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.93□□□□□ -0.5
Sec61a1P61620 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Gm13453-201ENSMUST00000118708 357 ntBASIC11.93□□□□□ -0.5
Sec61a1P61620 Gm9719-201ENSMUST00000162765 543 ntBASIC11.93□□□□□ -0.5
Sec61a1P61620 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.93□□□□□ -0.5
Sec61a1P61620 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Sec61a1P61620 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sec61a1P61620 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sec61a1P61620 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.93□□□□□ -0.5
Sec61a1P61620 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sec61a1P61620 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.93□□□□□ -0.5
Sec61a1P61620 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sec61a1P61620 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
Sec61a1P61620 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.93□□□□□ -0.5
Sec61a1P61620 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a1P61620 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Sec61a1P61620 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Sec61a1P61620 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sec61a1P61620 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sec61a1P61620 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.92□□□□□ -0.5
Sec61a1P61620 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.92□□□□□ -0.5
Sec61a1P61620 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.92□□□□□ -0.5
Sec61a1P61620 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sec61a1P61620 Gm27533-201ENSMUST00000183800 152 ntBASIC11.92□□□□□ -0.5
Sec61a1P61620 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.92□□□□□ -0.5
Sec61a1P61620 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Sec61a1P61620 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sec61a1P61620 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a1P61620 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.91□□□□□ -0.5
Sec61a1P61620 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.91□□□□□ -0.5
Sec61a1P61620 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Gm24543-201ENSMUST00000103867 82 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms