Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Sssca1P56873 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.92□□□□□ -0.66
Sssca1P56873 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
Sssca1P56873 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sssca1P56873 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.91□□□□□ -0.66
Sssca1P56873 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Sssca1P56873 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.91□□□□□ -0.66
Sssca1P56873 Gm15467-201ENSMUST00000120582 445 ntBASIC10.91□□□□□ -0.66
Sssca1P56873 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.91□□□□□ -0.66
Sssca1P56873 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.91□□□□□ -0.66
Sssca1P56873 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Sssca1P56873 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sssca1P56873 Gm18889-201ENSMUST00000174284 929 ntBASIC10.91□□□□□ -0.66
Sssca1P56873 Gm27494-201ENSMUST00000184735 189 ntBASIC10.91□□□□□ -0.66
Sssca1P56873 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.91□□□□□ -0.66
Sssca1P56873 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.91□□□□□ -0.66
Sssca1P56873 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Gm6916-202ENSMUST00000205523 195 ntBASIC10.91□□□□□ -0.66
Sssca1P56873 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sssca1P56873 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.91□□□□□ -0.66
Sssca1P56873 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Sssca1P56873 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.91□□□□□ -0.66
Sssca1P56873 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sssca1P56873 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Sssca1P56873 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.91□□□□□ -0.66
Sssca1P56873 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.91□□□□□ -0.66
Sssca1P56873 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sssca1P56873 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Sssca1P56873 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.9□□□□□ -0.66
Sssca1P56873 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sssca1P56873 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Sssca1P56873 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sssca1P56873 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.9□□□□□ -0.66
Sssca1P56873 Gm14494-201ENSMUST00000118786 435 ntBASIC10.9□□□□□ -0.66
Sssca1P56873 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sssca1P56873 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Sssca1P56873 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.9□□□□□ -0.66
Sssca1P56873 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.9□□□□□ -0.66
Sssca1P56873 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.9□□□□□ -0.66
Sssca1P56873 Gm18206-201ENSMUST00000207027 926 ntBASIC10.9□□□□□ -0.66
Sssca1P56873 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms