Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Gm14109-201ENSMUST00000118814 309 ntBASIC14.11□□□□□ -0.15
NcanP55066 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.11□□□□□ -0.15
NcanP55066 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.11□□□□□ -0.15
NcanP55066 Gm15547-201ENSMUST00000122152 333 ntBASIC14.11□□□□□ -0.15
NcanP55066 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.11□□□□□ -0.15
NcanP55066 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Gm27552-201ENSMUST00000183351 62 ntBASIC14.11□□□□□ -0.15
NcanP55066 Gm27844-201ENSMUST00000183613 62 ntBASIC14.11□□□□□ -0.15
NcanP55066 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.11□□□□□ -0.15
NcanP55066 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NcanP55066 Gm7003-201ENSMUST00000195089 312 ntBASIC14.11□□□□□ -0.15
NcanP55066 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
NcanP55066 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.11□□□□□ -0.15
NcanP55066 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.11□□□□□ -0.15
NcanP55066 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.11□□□□□ -0.15
NcanP55066 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.11□□□□□ -0.15
NcanP55066 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NcanP55066 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NcanP55066 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NcanP55066 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NcanP55066 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.1□□□□□ -0.15
NcanP55066 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.1□□□□□ -0.15
NcanP55066 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.1□□□□□ -0.15
NcanP55066 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.1□□□□□ -0.15
NcanP55066 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NcanP55066 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.1□□□□□ -0.15
NcanP55066 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.1□□□□□ -0.15
NcanP55066 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.1□□□□□ -0.15
NcanP55066 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC14.1□□□□□ -0.15
NcanP55066 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.1□□□□□ -0.15
NcanP55066 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NcanP55066 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.1□□□□□ -0.15
NcanP55066 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.1□□□□□ -0.15
NcanP55066 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.1□□□□□ -0.15
NcanP55066 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NcanP55066 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NcanP55066 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NcanP55066 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.09□□□□□ -0.15
NcanP55066 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NcanP55066 Gm13888-201ENSMUST00000119148 422 ntBASIC14.09□□□□□ -0.15
NcanP55066 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.09□□□□□ -0.15
NcanP55066 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.09□□□□□ -0.15
NcanP55066 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.09□□□□□ -0.15
NcanP55066 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.09□□□□□ -0.15
NcanP55066 Gm38210-201ENSMUST00000191944 809 ntBASIC14.09□□□□□ -0.15
NcanP55066 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Gm9555-201ENSMUST00000200908 583 ntBASIC14.09□□□□□ -0.15
NcanP55066 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.09□□□□□ -0.15
NcanP55066 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.09□□□□□ -0.15
NcanP55066 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Gm10179-201ENSMUST00000086233 688 ntBASIC14.09□□□□□ -0.15
NcanP55066 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms