Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.69□□□□□ -0.22
Ddx6P54823 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ddx6P54823 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.69□□□□□ -0.22
Ddx6P54823 Gm8762-201ENSMUST00000193486 339 ntBASIC13.69□□□□□ -0.22
Ddx6P54823 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.69□□□□□ -0.22
Ddx6P54823 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ddx6P54823 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.69□□□□□ -0.22
Ddx6P54823 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ddx6P54823 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ddx6P54823 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.68□□□□□ -0.22
Ddx6P54823 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.68□□□□□ -0.22
Ddx6P54823 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.68□□□□□ -0.22
Ddx6P54823 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 Mir686-201ENSMUST00000102174 109 ntBASIC13.68□□□□□ -0.22
Ddx6P54823 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.68□□□□□ -0.22
Ddx6P54823 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.68□□□□□ -0.22
Ddx6P54823 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 Gm7029-201ENSMUST00000173226 450 ntBASIC13.68□□□□□ -0.22
Ddx6P54823 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.68□□□□□ -0.22
Ddx6P54823 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ddx6P54823 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.68□□□□□ -0.22
Ddx6P54823 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ddx6P54823 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ddx6P54823 Olfr582-201ENSMUST00000098212 960 ntBASIC13.68□□□□□ -0.22
Ddx6P54823 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ddx6P54823 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.68□□□□□ -0.22
Ddx6P54823 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ddx6P54823 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.68□□□□□ -0.22
Ddx6P54823 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ddx6P54823 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx6P54823 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ddx6P54823 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.67□□□□□ -0.22
Ddx6P54823 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Gm22018-201ENSMUST00000104357 131 ntBASIC13.67□□□□□ -0.22
Ddx6P54823 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Ddx6P54823 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ddx6P54823 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.67□□□□□ -0.22
Ddx6P54823 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.67□□□□□ -0.22
Ddx6P54823 Gm25927-201ENSMUST00000175058 117 ntBASIC13.67□□□□□ -0.22
Ddx6P54823 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.67□□□□□ -0.22
Ddx6P54823 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.67□□□□□ -0.22
Ddx6P54823 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.67□□□□□ -0.22
Ddx6P54823 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.67□□□□□ -0.22
Ddx6P54823 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.67□□□□□ -0.22
Ddx6P54823 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ddx6P54823 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.67□□□□□ -0.22
Ddx6P54823 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ddx6P54823 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.67□□□□□ -0.22
Ddx6P54823 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ddx6P54823 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ddx6P54823 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx6P54823 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx6P54823 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms