Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.97□□□□□ -0.33
Sox3P53784 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Gm9726-201ENSMUST00000180321 678 ntBASIC12.97□□□□□ -0.33
Sox3P53784 Gm2495-201ENSMUST00000191160 466 ntBASIC12.97□□□□□ -0.33
Sox3P53784 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.97□□□□□ -0.33
Sox3P53784 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.97□□□□□ -0.33
Sox3P53784 Gm18056-201ENSMUST00000207670 568 ntBASIC12.97□□□□□ -0.33
Sox3P53784 Gm18061-201ENSMUST00000208350 562 ntBASIC12.97□□□□□ -0.33
Sox3P53784 Gm18063-201ENSMUST00000208529 568 ntBASIC12.97□□□□□ -0.33
Sox3P53784 Gm8463-201ENSMUST00000208573 613 ntBASIC12.97□□□□□ -0.33
Sox3P53784 Gm18052-201ENSMUST00000208750 559 ntBASIC12.97□□□□□ -0.33
Sox3P53784 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.97□□□□□ -0.33
Sox3P53784 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox3P53784 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox3P53784 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.97□□□□□ -0.33
Sox3P53784 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Sox3P53784 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Sox3P53784 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox3P53784 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox3P53784 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox3P53784 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox3P53784 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.96□□□□□ -0.33
Sox3P53784 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.96□□□□□ -0.33
Sox3P53784 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox3P53784 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox3P53784 Gm5187-201ENSMUST00000117317 991 ntBASIC12.96□□□□□ -0.33
Sox3P53784 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox3P53784 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.96□□□□□ -0.33
Sox3P53784 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox3P53784 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox3P53784 Gm27243-201ENSMUST00000183964 521 ntBASIC12.96□□□□□ -0.33
Sox3P53784 Gm33320-201ENSMUST00000192232 530 ntBASIC12.96□□□□□ -0.33
Sox3P53784 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sox3P53784 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.96□□□□□ -0.33
Sox3P53784 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox3P53784 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox3P53784 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox3P53784 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox3P53784 Gm6091-201ENSMUST00000098307 165 ntBASIC12.96□□□□□ -0.33
Sox3P53784 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox3P53784 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox3P53784 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.96□□□□□ -0.34
Sox3P53784 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.34
Sox3P53784 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sox3P53784 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sox3P53784 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox3P53784 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.96□□□□□ -0.34
Sox3P53784 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox3P53784 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.96□□□□□ -0.34
Sox3P53784 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox3P53784 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Sox3P53784 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.95□□□□□ -0.34
Sox3P53784 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sox3P53784 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Gm15460-201ENSMUST00000118147 391 ntBASIC12.95□□□□□ -0.34
Sox3P53784 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox3P53784 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sox3P53784 Gm8652-201ENSMUST00000181363 964 ntBASIC12.95□□□□□ -0.34
Sox3P53784 Gm27847-201ENSMUST00000183711 107 ntBASIC12.95□□□□□ -0.34
Sox3P53784 Gm27375-201ENSMUST00000183799 107 ntBASIC12.95□□□□□ -0.34
Sox3P53784 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox3P53784 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox3P53784 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.95□□□□□ -0.34
Sox3P53784 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.95□□□□□ -0.34
Sox3P53784 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sox3P53784 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms