Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.36□□□□□ -0.27
Pdx1P52946 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.36□□□□□ -0.27
Pdx1P52946 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.36□□□□□ -0.27
Pdx1P52946 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Pdx1P52946 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pdx1P52946 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.36□□□□□ -0.27
Pdx1P52946 Mir7654-201ENSMUST00000185082 70 ntBASIC13.36□□□□□ -0.27
Pdx1P52946 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.36□□□□□ -0.27
Pdx1P52946 Gm18307-201ENSMUST00000206864 949 ntBASIC13.36□□□□□ -0.27
Pdx1P52946 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.36□□□□□ -0.27
Pdx1P52946 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.36□□□□□ -0.27
Pdx1P52946 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pdx1P52946 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pdx1P52946 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.36□□□□□ -0.27
Pdx1P52946 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.36□□□□□ -0.27
Pdx1P52946 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdx1P52946 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pdx1P52946 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pdx1P52946 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pdx1P52946 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pdx1P52946 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.35□□□□□ -0.27
Pdx1P52946 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.35□□□□□ -0.27
Pdx1P52946 Gm14928-201ENSMUST00000120198 477 ntBASIC13.35□□□□□ -0.27
Pdx1P52946 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.35□□□□□ -0.27
Pdx1P52946 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Pdx1P52946 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdx1P52946 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pdx1P52946 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.35□□□□□ -0.27
Pdx1P52946 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdx1P52946 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Pdx1P52946 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Gm15678-201ENSMUST00000117573 960 ntBASIC13.34□□□□□ -0.27
Pdx1P52946 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.34□□□□□ -0.27
Pdx1P52946 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.34□□□□□ -0.27
Pdx1P52946 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pdx1P52946 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms