Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
SftpdP50404 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.23□□□□□ -0.13
SftpdP50404 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.23□□□□□ -0.13
SftpdP50404 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.23□□□□□ -0.13
SftpdP50404 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.23□□□□□ -0.13
SftpdP50404 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.23□□□□□ -0.13
SftpdP50404 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SftpdP50404 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SftpdP50404 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.22□□□□□ -0.13
SftpdP50404 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.22□□□□□ -0.13
SftpdP50404 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.22□□□□□ -0.13
SftpdP50404 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
SftpdP50404 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SftpdP50404 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.22□□□□□ -0.13
SftpdP50404 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.22□□□□□ -0.13
SftpdP50404 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Mir6392-201ENSMUST00000184924 108 ntBASIC14.22□□□□□ -0.13
SftpdP50404 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.22□□□□□ -0.13
SftpdP50404 Gm18307-201ENSMUST00000206864 949 ntBASIC14.22□□□□□ -0.13
SftpdP50404 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.22□□□□□ -0.13
SftpdP50404 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.22□□□□□ -0.13
SftpdP50404 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Gm15823-201ENSMUST00000064305 670 ntBASIC14.22□□□□□ -0.13
SftpdP50404 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.22□□□□□ -0.13
SftpdP50404 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.22□□□□□ -0.13
SftpdP50404 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.22□□□□□ -0.13
SftpdP50404 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SftpdP50404 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SftpdP50404 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SftpdP50404 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
SftpdP50404 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SftpdP50404 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SftpdP50404 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SftpdP50404 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SftpdP50404 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SftpdP50404 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.21□□□□□ -0.13
SftpdP50404 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.21□□□□□ -0.13
SftpdP50404 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SftpdP50404 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.21□□□□□ -0.13
SftpdP50404 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SftpdP50404 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SftpdP50404 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
SftpdP50404 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.21□□□□□ -0.13
SftpdP50404 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.21□□□□□ -0.13
SftpdP50404 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SftpdP50404 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SftpdP50404 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.21□□□□□ -0.14
SftpdP50404 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
SftpdP50404 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SftpdP50404 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SftpdP50404 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms