Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
GdnfP48540 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
GdnfP48540 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.86□□□□□ -0.51
GdnfP48540 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.86□□□□□ -0.51
GdnfP48540 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.86□□□□□ -0.51
GdnfP48540 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.86□□□□□ -0.51
GdnfP48540 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.86□□□□□ -0.51
GdnfP48540 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
GdnfP48540 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
GdnfP48540 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
GdnfP48540 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.86□□□□□ -0.51
GdnfP48540 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.86□□□□□ -0.51
GdnfP48540 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Gm25948-201ENSMUST00000175334 112 ntBASIC11.86□□□□□ -0.51
GdnfP48540 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Gm10253-201ENSMUST00000194270 940 ntBASIC11.86□□□□□ -0.51
GdnfP48540 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.86□□□□□ -0.51
GdnfP48540 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.86□□□□□ -0.51
GdnfP48540 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
GdnfP48540 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
GdnfP48540 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
GdnfP48540 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.86□□□□□ -0.51
GdnfP48540 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.86□□□□□ -0.51
GdnfP48540 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
GdnfP48540 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
GdnfP48540 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
GdnfP48540 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.85□□□□□ -0.51
GdnfP48540 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.85□□□□□ -0.51
GdnfP48540 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.85□□□□□ -0.51
GdnfP48540 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.85□□□□□ -0.51
GdnfP48540 Gm6222-201ENSMUST00000120787 396 ntBASIC11.85□□□□□ -0.51
GdnfP48540 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
GdnfP48540 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GdnfP48540 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
GdnfP48540 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
GdnfP48540 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms