Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.17□□□□□ -0.14
Rfx2P48379 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Rfx2P48379 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.17□□□□□ -0.14
Rfx2P48379 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.17□□□□□ -0.14
Rfx2P48379 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rfx2P48379 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rfx2P48379 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfx2P48379 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.16□□□□□ -0.14
Rfx2P48379 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rfx2P48379 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Gm15371-201ENSMUST00000117057 784 ntBASIC14.16□□□□□ -0.14
Rfx2P48379 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.16□□□□□ -0.14
Rfx2P48379 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Gm15429-201ENSMUST00000151268 798 ntBASIC14.16□□□□□ -0.14
Rfx2P48379 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rfx2P48379 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rfx2P48379 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.16□□□□□ -0.14
Rfx2P48379 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.16□□□□□ -0.14
Rfx2P48379 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.16□□□□□ -0.14
Rfx2P48379 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfx2P48379 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.16□□□□□ -0.14
Rfx2P48379 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.16□□□□□ -0.14
Rfx2P48379 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfx2P48379 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfx2P48379 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rfx2P48379 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rfx2P48379 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.16□□□□□ -0.14
Rfx2P48379 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx2P48379 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.15□□□□□ -0.14
Rfx2P48379 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.15□□□□□ -0.14
Rfx2P48379 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfx2P48379 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfx2P48379 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.15□□□□□ -0.14
Rfx2P48379 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.15□□□□□ -0.14
Rfx2P48379 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rfx2P48379 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfx2P48379 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.15□□□□□ -0.14
Rfx2P48379 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rfx2P48379 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Rfx2P48379 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfx2P48379 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx2P48379 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.14□□□□□ -0.15
Rfx2P48379 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rfx2P48379 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Gm12485-201ENSMUST00000119641 291 ntBASIC14.14□□□□□ -0.15
Rfx2P48379 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.14□□□□□ -0.15
Rfx2P48379 Gm26464-201ENSMUST00000157094 305 ntBASIC14.14□□□□□ -0.15
Rfx2P48379 Gm27486-201ENSMUST00000184923 80 ntBASIC14.14□□□□□ -0.15
Rfx2P48379 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.14□□□□□ -0.15
Rfx2P48379 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Mir497b-201ENSMUST00000093601 125 ntBASIC14.14□□□□□ -0.15
Rfx2P48379 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms