Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC8.72□□□□□ -1.01
Xcl1P47993 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Xcl1P47993 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC8.72□□□□□ -1.01
Xcl1P47993 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC8.72□□□□□ -1.01
Xcl1P47993 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Xcl1P47993 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC8.71□□□□□ -1.01
Xcl1P47993 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Gm44851-201ENSMUST00000205735 2309 ntBASIC8.71□□□□□ -1.01
Xcl1P47993 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Xcl1P47993 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC8.71□□□□□ -1.01
Xcl1P47993 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC8.71□□□□□ -1.01
Xcl1P47993 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC8.71□□□□□ -1.01
Xcl1P47993 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Zkscan4-202ENSMUST00000225845 1506 ntBASIC8.71□□□□□ -1.01
Xcl1P47993 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Xcl1P47993 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC8.71□□□□□ -1.02
Xcl1P47993 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC8.71□□□□□ -1.02
Xcl1P47993 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC8.71□□□□□ -1.02
Xcl1P47993 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Xcl1P47993 Gm44719-201ENSMUST00000206404 149 ntBASIC8.71□□□□□ -1.02
Xcl1P47993 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Xcl1P47993 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Xcl1P47993 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Xcl1P47993 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC8.71□□□□□ -1.02
Xcl1P47993 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
Xcl1P47993 Gm9347-201ENSMUST00000211473 1607 ntBASIC8.71□□□□□ -1.02
Xcl1P47993 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC8.71□□□□□ -1.02
Xcl1P47993 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Xcl1P47993 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Xcl1P47993 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Gm7104-201ENSMUST00000179741 2532 ntBASIC8.71□□□□□ -1.02
Xcl1P47993 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Xcl1P47993 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Xcl1P47993 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Xcl1P47993 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Xcl1P47993 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Xcl1P47993 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Xcl1P47993 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Xcl1P47993 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Xcl1P47993 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Xcl1P47993 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Xcl1P47993 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Xcl1P47993 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Xcl1P47993 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms