Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TfamP40630 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TfamP40630 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TfamP40630 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TfamP40630 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.1□□□□□ -0.31
TfamP40630 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TfamP40630 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.1□□□□□ -0.31
TfamP40630 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TfamP40630 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Gm14767-201ENSMUST00000121559 586 ntBASIC13.1□□□□□ -0.31
TfamP40630 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.1□□□□□ -0.31
TfamP40630 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.1□□□□□ -0.31
TfamP40630 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.1□□□□□ -0.31
TfamP40630 Gm24420-201ENSMUST00000176676 59 ntBASIC13.1□□□□□ -0.31
TfamP40630 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Gm43703-201ENSMUST00000200523 763 ntBASIC13.1□□□□□ -0.31
TfamP40630 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TfamP40630 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TfamP40630 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TfamP40630 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.09□□□□□ -0.31
TfamP40630 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TfamP40630 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
TfamP40630 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Gm27680-201ENSMUST00000184192 160 ntBASIC13.09□□□□□ -0.31
TfamP40630 Gm17837-201ENSMUST00000186435 985 ntBASIC13.09□□□□□ -0.31
TfamP40630 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TfamP40630 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.09□□□□□ -0.31
TfamP40630 Gm5425-201ENSMUST00000214125 459 ntBASIC13.09□□□□□ -0.31
TfamP40630 Gm18041-201ENSMUST00000218210 618 ntBASIC13.09□□□□□ -0.31
TfamP40630 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.09□□□□□ -0.31
TfamP40630 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TfamP40630 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TfamP40630 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.09□□□□□ -0.31
TfamP40630 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TfamP40630 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.08□□□□□ -0.31
TfamP40630 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.08□□□□□ -0.31
TfamP40630 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TfamP40630 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TfamP40630 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
TfamP40630 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TfamP40630 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TfamP40630 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TfamP40630 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TfamP40630 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TfamP40630 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.08□□□□□ -0.32
TfamP40630 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.08□□□□□ -0.32
TfamP40630 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.08□□□□□ -0.32
TfamP40630 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.08□□□□□ -0.32
TfamP40630 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TfamP40630 Gm6912-201ENSMUST00000117218 544 ntBASIC13.08□□□□□ -0.32
TfamP40630 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.08□□□□□ -0.32
TfamP40630 Gm27321-201ENSMUST00000185021 205 ntBASIC13.08□□□□□ -0.32
TfamP40630 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms