Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdh4P39038 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh4P39038 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh4P39038 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh4P39038 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdh4P39038 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.94□□□□□ -0.34
Cdh4P39038 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh4P39038 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh4P39038 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdh4P39038 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdh4P39038 Gm6745-201ENSMUST00000199216 526 ntBASIC12.94□□□□□ -0.34
Cdh4P39038 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh4P39038 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Cdh4P39038 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cdh4P39038 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cdh4P39038 Gm6180-201ENSMUST00000065243 498 ntBASIC12.94□□□□□ -0.34
Cdh4P39038 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh4P39038 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh4P39038 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdh4P39038 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cdh4P39038 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh4P39038 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh4P39038 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.94□□□□□ -0.34
Cdh4P39038 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh4P39038 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh4P39038 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh4P39038 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cdh4P39038 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh4P39038 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.94□□□□□ -0.34
Cdh4P39038 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Cdh4P39038 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.93□□□□□ -0.34
Cdh4P39038 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.93□□□□□ -0.34
Cdh4P39038 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.93□□□□□ -0.34
Cdh4P39038 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdh4P39038 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdh4P39038 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdh4P39038 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.93□□□□□ -0.34
Cdh4P39038 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.93□□□□□ -0.34
Cdh4P39038 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Gm24447-201ENSMUST00000083977 338 ntBASIC12.93□□□□□ -0.34
Cdh4P39038 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdh4P39038 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.93□□□□□ -0.34
Cdh4P39038 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Cdh4P39038 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdh4P39038 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh4P39038 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdh4P39038 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.92□□□□□ -0.34
Cdh4P39038 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.92□□□□□ -0.34
Cdh4P39038 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdh4P39038 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdh4P39038 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdh4P39038 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdh4P39038 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.92□□□□□ -0.34
Cdh4P39038 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Gm9794-201ENSMUST00000202370 423 ntBASIC12.92□□□□□ -0.34
Cdh4P39038 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdh4P39038 Gm17330-201ENSMUST00000221047 165 ntBASIC12.92□□□□□ -0.34
Cdh4P39038 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdh4P39038 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh4P39038 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms