Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.52□□□□□ -0.41
Thbs1P35441 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.52□□□□□ -0.41
Thbs1P35441 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Thbs1P35441 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Grk6-205ENSMUST00000224653 2976 ntBASIC12.52□□□□□ -0.41
Thbs1P35441 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.52□□□□□ -0.41
Thbs1P35441 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Thbs1P35441 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.52□□□□□ -0.41
Thbs1P35441 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.52□□□□□ -0.41
Thbs1P35441 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.52□□□□□ -0.41
Thbs1P35441 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Thbs1P35441 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Thbs1P35441 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Thbs1P35441 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.51□□□□□ -0.41
Thbs1P35441 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.51□□□□□ -0.41
Thbs1P35441 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.51□□□□□ -0.41
Thbs1P35441 Gm25116-201ENSMUST00000157191 122 ntBASIC12.51□□□□□ -0.41
Thbs1P35441 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Gm17330-201ENSMUST00000221047 165 ntBASIC12.51□□□□□ -0.41
Thbs1P35441 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.51□□□□□ -0.41
Thbs1P35441 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Thbs1P35441 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.51□□□□□ -0.41
Thbs1P35441 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Thbs1P35441 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs1P35441 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.51□□□□□ -0.41
Thbs1P35441 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Thbs1P35441 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.5□□□□□ -0.41
Thbs1P35441 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Thbs1P35441 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Thbs1P35441 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.5□□□□□ -0.41
Thbs1P35441 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.5□□□□□ -0.41
Thbs1P35441 Gm15678-201ENSMUST00000117573 960 ntBASIC12.5□□□□□ -0.41
Thbs1P35441 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.5□□□□□ -0.41
Thbs1P35441 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC12.5□□□□□ -0.41
Thbs1P35441 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Thbs1P35441 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.5□□□□□ -0.41
Thbs1P35441 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Thbs1P35441 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.5□□□□□ -0.41
Thbs1P35441 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms