Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Gm4995-201ENSMUST00000117247 432 ntBASIC11.63□□□□□ -0.55
Slc6a1P31648 Gm13597-201ENSMUST00000121239 375 ntBASIC11.63□□□□□ -0.55
Slc6a1P31648 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Gm18737-201ENSMUST00000173594 937 ntBASIC11.63□□□□□ -0.55
Slc6a1P31648 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Slc6a1P31648 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a1P31648 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.62□□□□□ -0.55
Slc6a1P31648 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Slc6a1P31648 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Rprl2-201ENSMUST00000157150 290 ntBASIC11.62□□□□□ -0.55
Slc6a1P31648 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Gm45098-201ENSMUST00000207179 657 ntBASIC11.62□□□□□ -0.55
Slc6a1P31648 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.62□□□□□ -0.55
Slc6a1P31648 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Slc6a1P31648 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Slc6a1P31648 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Slc6a1P31648 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Slc6a1P31648 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a1P31648 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Slc6a1P31648 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms