Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Mmp3P28862 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.41□□□□□ -0.1
Mmp3P28862 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Mmp3P28862 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Mmp3P28862 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.41□□□□□ -0.1
Mmp3P28862 Gm26927-201ENSMUST00000182385 965 ntBASIC14.41□□□□□ -0.1
Mmp3P28862 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.41□□□□□ -0.1
Mmp3P28862 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.41□□□□□ -0.1
Mmp3P28862 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.41□□□□□ -0.1
Mmp3P28862 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp3P28862 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Mmp3P28862 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 Mir686-201ENSMUST00000102174 109 ntBASIC14.4□□□□□ -0.1
Mmp3P28862 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Mmp3P28862 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Mmp3P28862 Gm15198-201ENSMUST00000117283 177 ntBASIC14.4□□□□□ -0.1
Mmp3P28862 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Mmp3P28862 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.4□□□□□ -0.1
Mmp3P28862 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Mmp3P28862 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Mmp3P28862 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.4□□□□□ -0.1
Mmp3P28862 Gm19184-201ENSMUST00000196798 928 ntBASIC14.4□□□□□ -0.1
Mmp3P28862 Gm45880-201ENSMUST00000213041 853 ntBASIC14.4□□□□□ -0.1
Mmp3P28862 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.4□□□□□ -0.1
Mmp3P28862 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Mmp3P28862 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp3P28862 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Mmp3P28862 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.4□□□□□ -0.1
Mmp3P28862 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.4□□□□□ -0.1
Mmp3P28862 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.39□□□□□ -0.11
Mmp3P28862 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Mmp3P28862 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Mmp3P28862 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.39□□□□□ -0.11
Mmp3P28862 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Mmp3P28862 Gm22018-201ENSMUST00000104357 131 ntBASIC14.39□□□□□ -0.11
Mmp3P28862 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.39□□□□□ -0.11
Mmp3P28862 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.39□□□□□ -0.11
Mmp3P28862 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Mmp3P28862 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.39□□□□□ -0.11
Mmp3P28862 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.39□□□□□ -0.11
Mmp3P28862 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.39□□□□□ -0.11
Mmp3P28862 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.39□□□□□ -0.11
Mmp3P28862 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.39□□□□□ -0.11
Mmp3P28862 Gm9823-201ENSMUST00000051212 327 ntBASIC14.39□□□□□ -0.11
Mmp3P28862 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.39□□□□□ -0.11
Mmp3P28862 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.39□□□□□ -0.11
Mmp3P28862 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.39□□□□□ -0.11
Mmp3P28862 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Mmp3P28862 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp3P28862 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.38□□□□□ -0.11
Mmp3P28862 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp3P28862 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms