Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P20040 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P20040 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P20040 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
P20040 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P20040 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
P20040 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P20040 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.03□□□□□ -0.48
P20040 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P20040 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P20040 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
P20040 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P20040 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P20040 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
P20040 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P20040 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
P20040 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
P20040 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
P20040 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P20040 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.02□□□□□ -0.48
P20040 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
P20040 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.02□□□□□ -0.48
P20040 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
P20040 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
P20040 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
P20040 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
P20040 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
P20040 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.02□□□□□ -0.49
P20040 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.02□□□□□ -0.49
P20040 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P20040 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.02□□□□□ -0.49
P20040 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
P20040 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
P20040 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
P20040 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
P20040 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
P20040 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
P20040 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.01□□□□□ -0.49
P20040 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
P20040 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Mir6977-201ENSMUST00000184960 64 ntBASIC12.01□□□□□ -0.49
P20040 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.01□□□□□ -0.49
P20040 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.01□□□□□ -0.49
P20040 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.01□□□□□ -0.49
P20040 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.01□□□□□ -0.49
P20040 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
P20040 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
P20040 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P20040 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
P20040 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P20040 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
P20040 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P20040 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P20040 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P20040 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P20040 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P20040 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
P20040 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12□□□□□ -0.49
P20040 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P20040 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12□□□□□ -0.49
P20040 Gm15957-201ENSMUST00000118893 974 ntBASIC12□□□□□ -0.49
P20040 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12□□□□□ -0.49
P20040 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P20040 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms