Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Hmgn1P18608 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmgn1P18608 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmgn1P18608 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmgn1P18608 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Hmgn1P18608 Gm18889-201ENSMUST00000174284 929 ntBASIC12.36□□□□□ -0.43
Hmgn1P18608 Gm21470-201ENSMUST00000187680 696 ntBASIC12.36□□□□□ -0.43
Hmgn1P18608 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.36□□□□□ -0.43
Hmgn1P18608 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.36□□□□□ -0.43
Hmgn1P18608 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Hmgn1P18608 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.36□□□□□ -0.43
Hmgn1P18608 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmgn1P18608 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmgn1P18608 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn1P18608 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.35□□□□□ -0.43
Hmgn1P18608 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Gm15460-201ENSMUST00000118147 391 ntBASIC12.35□□□□□ -0.43
Hmgn1P18608 Gm13385-201ENSMUST00000121089 220 ntBASIC12.35□□□□□ -0.43
Hmgn1P18608 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.35□□□□□ -0.43
Hmgn1P18608 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.35□□□□□ -0.43
Hmgn1P18608 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.35□□□□□ -0.43
Hmgn1P18608 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.35□□□□□ -0.43
Hmgn1P18608 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn1P18608 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hmgn1P18608 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn1P18608 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn1P18608 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hmgn1P18608 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn1P18608 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn1P18608 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hmgn1P18608 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn1P18608 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.34□□□□□ -0.43
Hmgn1P18608 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn1P18608 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn1P18608 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn1P18608 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn1P18608 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn1P18608 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms