Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.88□□□□□ -0.35
Lire1P11260 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Lire1P11260 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.88□□□□□ -0.35
Lire1P11260 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.88□□□□□ -0.35
Lire1P11260 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Gm27533-201ENSMUST00000183800 152 ntBASIC12.88□□□□□ -0.35
Lire1P11260 Gm38294-201ENSMUST00000192831 381 ntBASIC12.88□□□□□ -0.35
Lire1P11260 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.88□□□□□ -0.35
Lire1P11260 Gm44344-201ENSMUST00000200287 129 ntBASIC12.88□□□□□ -0.35
Lire1P11260 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.88□□□□□ -0.35
Lire1P11260 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.88□□□□□ -0.35
Lire1P11260 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.88□□□□□ -0.35
Lire1P11260 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lire1P11260 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.88□□□□□ -0.35
Lire1P11260 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Lire1P11260 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.88□□□□□ -0.35
Lire1P11260 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lire1P11260 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lire1P11260 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lire1P11260 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lire1P11260 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Lire1P11260 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.87□□□□□ -0.35
Lire1P11260 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lire1P11260 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lire1P11260 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lire1P11260 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.86□□□□□ -0.35
Lire1P11260 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.86□□□□□ -0.35
Lire1P11260 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.86□□□□□ -0.35
Lire1P11260 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.86□□□□□ -0.35
Lire1P11260 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.86□□□□□ -0.35
Lire1P11260 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lire1P11260 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Lire1P11260 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.86□□□□□ -0.35
Lire1P11260 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.86□□□□□ -0.35
Lire1P11260 Gm7775-201ENSMUST00000218871 853 ntBASIC12.86□□□□□ -0.35
Lire1P11260 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lire1P11260 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lire1P11260 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Lire1P11260 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.86□□□□□ -0.35
Lire1P11260 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms