Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.89□□□□□ -0.51
Ccl3P10855 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl3P10855 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
Ccl3P10855 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ccl3P10855 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Gm22323-201ENSMUST00000103832 109 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Gm4986-201ENSMUST00000119731 549 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Gm13297-201ENSMUST00000120205 934 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Gm11637-201ENSMUST00000120601 592 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Gm14381-201ENSMUST00000122105 414 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Gm12134-201ENSMUST00000122109 520 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.88□□□□□ -0.51
Ccl3P10855 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.88□□□□□ -0.51
Ccl3P10855 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.88□□□□□ -0.51
Ccl3P10855 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ccl3P10855 Gm37466-201ENSMUST00000195692 652 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Gm7046-201ENSMUST00000221351 977 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccl3P10855 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.88□□□□□ -0.51
Ccl3P10855 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ccl3P10855 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl3P10855 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.87□□□□□ -0.51
Ccl3P10855 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.87□□□□□ -0.51
Ccl3P10855 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Ccl3P10855 Gm24255-201ENSMUST00000104481 128 ntBASIC11.87□□□□□ -0.51
Ccl3P10855 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.87□□□□□ -0.51
Ccl3P10855 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ccl3P10855 Gm26185-201ENSMUST00000157692 266 ntBASIC11.87□□□□□ -0.51
Ccl3P10855 Gm16570-201ENSMUST00000161951 436 ntBASIC11.87□□□□□ -0.51
Ccl3P10855 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Ccl3P10855 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Mospd4-201ENSMUST00000180618 576 ntBASIC11.87□□□□□ -0.51
Ccl3P10855 Gm3890-201ENSMUST00000182416 207 ntBASIC11.87□□□□□ -0.51
Ccl3P10855 Gm19163-201ENSMUST00000223313 780 ntBASIC11.87□□□□□ -0.51
Ccl3P10855 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ccl3P10855 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.87□□□□□ -0.51
Ccl3P10855 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccl3P10855 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.87□□□□□ -0.51
Ccl3P10855 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ccl3P10855 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl3P10855 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.87□□□□□ -0.51
Ccl3P10855 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ccl3P10855 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccl3P10855 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ccl3P10855 Gm12363-201ENSMUST00000122250 668 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms