Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.92□□□□□ -0.02
Hoxc6P10629 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.92□□□□□ -0.02
Hoxc6P10629 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.92□□□□□ -0.02
Hoxc6P10629 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
Hoxc6P10629 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Hoxc6P10629 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Hoxc6P10629 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Gm24548-201ENSMUST00000158650 108 ntBASIC14.92□□□□□ -0.02
Hoxc6P10629 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.92□□□□□ -0.02
Hoxc6P10629 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Gm17376-201ENSMUST00000166016 84 ntBASIC14.92□□□□□ -0.02
Hoxc6P10629 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Gm20482-202ENSMUST00000174729 825 ntBASIC14.92□□□□□ -0.02
Hoxc6P10629 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.92□□□□□ -0.02
Hoxc6P10629 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Hoxc6P10629 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.92□□□□□ -0.02
Hoxc6P10629 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.92□□□□□ -0.02
Hoxc6P10629 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.92□□□□□ -0.02
Hoxc6P10629 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.92□□□□□ -0.02
Hoxc6P10629 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Hoxc6P10629 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc6P10629 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Hoxc6P10629 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Gm16479-201ENSMUST00000121706 932 ntBASIC14.91□□□□□ -0.02
Hoxc6P10629 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.91□□□□□ -0.02
Hoxc6P10629 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.91□□□□□ -0.02
Hoxc6P10629 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Hoxc6P10629 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Mir433-201ENSMUST00000093564 124 ntBASIC14.91□□□□□ -0.02
Hoxc6P10629 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.91□□□□□ -0.02
Hoxc6P10629 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.91□□□□□ -0.02
Hoxc6P10629 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Hoxc6P10629 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc6P10629 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hoxc6P10629 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Hoxc6P10629 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Hoxc6P10629 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.9□□□□□ -0.02
Hoxc6P10629 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Hoxc6P10629 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Hoxc6P10629 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hoxc6P10629 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.9□□□□□ -0.02
Hoxc6P10629 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Gm4768-201ENSMUST00000206199 686 ntBASIC14.9□□□□□ -0.02
Hoxc6P10629 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Gm19163-201ENSMUST00000223313 780 ntBASIC14.9□□□□□ -0.02
Hoxc6P10629 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hoxc6P10629 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxc6P10629 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.9□□□□□ -0.02
Hoxc6P10629 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms