Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.28■□□□□ 0.04
Surf1P09925 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Surf1P09925 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Surf1P09925 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Surf1P09925 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Surf1P09925 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Surf1P09925 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Surf1P09925 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Surf1P09925 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Surf1P09925 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Surf1P09925 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Surf1P09925 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Surf1P09925 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Surf1P09925 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.27■□□□□ 0.04
Surf1P09925 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Surf1P09925 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Surf1P09925 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.27■□□□□ 0.04
Surf1P09925 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.27■□□□□ 0.04
Surf1P09925 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.27■□□□□ 0.04
Surf1P09925 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Surf1P09925 Gm24420-201ENSMUST00000176676 59 ntBASIC15.27■□□□□ 0.04
Surf1P09925 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Surf1P09925 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.27■□□□□ 0.04
Surf1P09925 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Surf1P09925 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Surf1P09925 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Surf1P09925 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Surf1P09925 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Surf1P09925 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Surf1P09925 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.27■□□□□ 0.03
Surf1P09925 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Surf1P09925 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Surf1P09925 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Surf1P09925 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Surf1P09925 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Surf1P09925 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Surf1P09925 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Surf1P09925 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.26■□□□□ 0.03
Surf1P09925 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Surf1P09925 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Surf1P09925 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Surf1P09925 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 Gm28631-201ENSMUST00000190740 334 ntBASIC15.26■□□□□ 0.03
Surf1P09925 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.26■□□□□ 0.03
Surf1P09925 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.26■□□□□ 0.03
Surf1P09925 Gm19220-201ENSMUST00000222682 803 ntBASIC15.26■□□□□ 0.03
Surf1P09925 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Surf1P09925 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Surf1P09925 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Surf1P09925 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf1P09925 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Surf1P09925 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.25■□□□□ 0.03
Surf1P09925 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Surf1P09925 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf1P09925 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf1P09925 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Surf1P09925 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf1P09925 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Surf1P09925 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf1P09925 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Surf1P09925 Mir698-201ENSMUST00000102164 109 ntBASIC15.25■□□□□ 0.03
Surf1P09925 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Surf1P09925 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Surf1P09925 Gm15240-201ENSMUST00000118156 720 ntBASIC15.25■□□□□ 0.03
Surf1P09925 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.25■□□□□ 0.03
Surf1P09925 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.25■□□□□ 0.03
Surf1P09925 Mir497b-201ENSMUST00000093601 125 ntBASIC15.25■□□□□ 0.03
Surf1P09925 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf1P09925 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf1P09925 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Surf1P09925 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Surf1P09925 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf1P09925 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Surf1P09925 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Surf1P09925 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf1P09925 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf1P09925 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Surf1P09925 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.25■□□□□ 0.03
Surf1P09925 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf1P09925 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf1P09925 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Surf1P09925 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf1P09925 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Surf1P09925 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Surf1P09925 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Surf1P09925 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf1P09925 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms