Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NclP09405 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NclP09405 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NclP09405 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NclP09405 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
NclP09405 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NclP09405 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NclP09405 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NclP09405 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NclP09405 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NclP09405 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NclP09405 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NclP09405 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NclP09405 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NclP09405 Gm12384-201ENSMUST00000119228 919 ntBASIC20.01■□□□□ 0.79
NclP09405 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC20.01■□□□□ 0.79
NclP09405 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC20.01■□□□□ 0.79
NclP09405 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NclP09405 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NclP09405 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NclP09405 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NclP09405 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NclP09405 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
NclP09405 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NclP09405 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC20■□□□□ 0.79
NclP09405 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC20■□□□□ 0.79
NclP09405 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC20■□□□□ 0.79
NclP09405 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC20■□□□□ 0.79
NclP09405 Gm40466-201ENSMUST00000212174 422 ntBASIC20■□□□□ 0.79
NclP09405 AC155237.1-201ENSMUST00000226196 1279 ntBASIC20■□□□□ 0.79
NclP09405 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC20■□□□□ 0.79
NclP09405 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NclP09405 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NclP09405 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NclP09405 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NclP09405 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
NclP09405 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Gm11400-201ENSMUST00000120853 1214 ntBASIC19.99■□□□□ 0.79
NclP09405 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC19.99■□□□□ 0.79
NclP09405 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Gm37424-201ENSMUST00000191727 561 ntBASIC19.99■□□□□ 0.79
NclP09405 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC19.99■□□□□ 0.79
NclP09405 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC19.99■□□□□ 0.79
NclP09405 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NclP09405 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NclP09405 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC19.99■□□□□ 0.79
NclP09405 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NclP09405 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NclP09405 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Gm16177-201ENSMUST00000120728 718 ntBASIC19.98■□□□□ 0.79
NclP09405 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Gm27331-201ENSMUST00000183705 60 ntBASIC19.98■□□□□ 0.79
NclP09405 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC19.98■□□□□ 0.79
NclP09405 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC19.98■□□□□ 0.79
NclP09405 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NclP09405 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Gm7553-201ENSMUST00000185805 1426 ntBASIC19.98■□□□□ 0.79
NclP09405 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NclP09405 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms