Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.3□□□□□ -0.12
TnfP06804 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.3□□□□□ -0.12
TnfP06804 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.3□□□□□ -0.12
TnfP06804 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Gm29705-201ENSMUST00000212598 474 ntBASIC14.3□□□□□ -0.12
TnfP06804 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.3□□□□□ -0.12
TnfP06804 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Gm16372-201ENSMUST00000073088 450 ntBASIC14.3□□□□□ -0.12
TnfP06804 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TnfP06804 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TnfP06804 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.3□□□□□ -0.12
TnfP06804 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.3□□□□□ -0.12
TnfP06804 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TnfP06804 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.29□□□□□ -0.12
TnfP06804 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TnfP06804 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.29□□□□□ -0.12
TnfP06804 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TnfP06804 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TnfP06804 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.29□□□□□ -0.12
TnfP06804 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.29□□□□□ -0.12
TnfP06804 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.29□□□□□ -0.12
TnfP06804 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.29□□□□□ -0.12
TnfP06804 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TnfP06804 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.29□□□□□ -0.12
TnfP06804 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TnfP06804 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TnfP06804 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TnfP06804 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Gm14350-201ENSMUST00000116642 640 ntBASIC14.28□□□□□ -0.12
TnfP06804 Gm12384-201ENSMUST00000119228 919 ntBASIC14.28□□□□□ -0.12
TnfP06804 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.28□□□□□ -0.12
TnfP06804 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.28□□□□□ -0.12
TnfP06804 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.28□□□□□ -0.12
TnfP06804 Snora78-201ENSMUST00000158630 128 ntBASIC14.28□□□□□ -0.12
TnfP06804 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.28□□□□□ -0.12
TnfP06804 Gm45841-201ENSMUST00000207700 164 ntBASIC14.28□□□□□ -0.12
TnfP06804 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Gm9899-201ENSMUST00000065519 555 ntBASIC14.28□□□□□ -0.12
TnfP06804 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TnfP06804 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TnfP06804 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
TnfP06804 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TnfP06804 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TnfP06804 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TnfP06804 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TnfP06804 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TnfP06804 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TnfP06804 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TnfP06804 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TnfP06804 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TnfP06804 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TnfP06804 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TnfP06804 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms