Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.28□□□□□ -0.28
Hoxa4P06798 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.28□□□□□ -0.28
Hoxa4P06798 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.28□□□□□ -0.28
Hoxa4P06798 Gm45841-201ENSMUST00000207700 164 ntBASIC13.28□□□□□ -0.28
Hoxa4P06798 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Hoxa4P06798 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.28□□□□□ -0.28
Hoxa4P06798 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.28□□□□□ -0.28
Hoxa4P06798 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Hoxa4P06798 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxa4P06798 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxa4P06798 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxa4P06798 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxa4P06798 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxa4P06798 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Hoxa4P06798 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxa4P06798 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Hoxa4P06798 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxa4P06798 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 Gm8213-201ENSMUST00000118191 441 ntBASIC13.27□□□□□ -0.29
Hoxa4P06798 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.27□□□□□ -0.29
Hoxa4P06798 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.27□□□□□ -0.29
Hoxa4P06798 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Hoxa4P06798 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 Mir7221-201ENSMUST00000184009 72 ntBASIC13.27□□□□□ -0.29
Hoxa4P06798 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.27□□□□□ -0.29
Hoxa4P06798 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.27□□□□□ -0.29
Hoxa4P06798 Gm38671-201ENSMUST00000200573 130 ntBASIC13.27□□□□□ -0.29
Hoxa4P06798 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.27□□□□□ -0.29
Hoxa4P06798 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.27□□□□□ -0.29
Hoxa4P06798 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.27□□□□□ -0.29
Hoxa4P06798 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.27□□□□□ -0.29
Hoxa4P06798 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.27□□□□□ -0.29
Hoxa4P06798 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa4P06798 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Gm6447-201ENSMUST00000118905 835 ntBASIC13.26□□□□□ -0.29
Hoxa4P06798 Gm10156-201ENSMUST00000122364 462 ntBASIC13.26□□□□□ -0.29
Hoxa4P06798 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxa4P06798 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.26□□□□□ -0.29
Hoxa4P06798 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.26□□□□□ -0.29
Hoxa4P06798 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxa4P06798 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.26□□□□□ -0.29
Hoxa4P06798 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxa4P06798 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.26□□□□□ -0.29
Hoxa4P06798 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hoxa4P06798 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa4P06798 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms