Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm10226O88253 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm10226O88253 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm10226O88253 Gm8810-201ENSMUST00000172895 754 ntBASIC10.39□□□□□ -0.75
Gm10226O88253 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.39□□□□□ -0.75
Gm10226O88253 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm10226O88253 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm10226O88253 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.39□□□□□ -0.75
Gm10226O88253 Gm16372-201ENSMUST00000073088 450 ntBASIC10.39□□□□□ -0.75
Gm10226O88253 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Gm10226O88253 Gm6091-201ENSMUST00000098307 165 ntBASIC10.39□□□□□ -0.75
Gm10226O88253 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.39□□□□□ -0.75
Gm10226O88253 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Gm10226O88253 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.39□□□□□ -0.75
Gm10226O88253 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Gm10226O88253 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC10.39□□□□□ -0.75
Gm10226O88253 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Gm10226O88253 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Gm10226O88253 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Gm10226O88253 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.38□□□□□ -0.75
Gm10226O88253 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.38□□□□□ -0.75
Gm10226O88253 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.38□□□□□ -0.75
Gm10226O88253 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.38□□□□□ -0.75
Gm10226O88253 AC166491.1-201ENSMUST00000227053 2308 ntBASIC10.38□□□□□ -0.75
Gm10226O88253 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.38□□□□□ -0.75
Gm10226O88253 Gm6447-201ENSMUST00000118905 835 ntBASIC10.38□□□□□ -0.75
Gm10226O88253 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.38□□□□□ -0.75
Gm10226O88253 Gm24644-201ENSMUST00000157114 139 ntBASIC10.38□□□□□ -0.75
Gm10226O88253 Gm29649-201ENSMUST00000185649 419 ntBASIC10.38□□□□□ -0.75
Gm10226O88253 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.38□□□□□ -0.75
Gm10226O88253 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.38□□□□□ -0.75
Gm10226O88253 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.38□□□□□ -0.75
Gm10226O88253 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Gm10226O88253 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Gm10226O88253 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.38□□□□□ -0.75
Gm10226O88253 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.38□□□□□ -0.75
Gm10226O88253 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Gm10226O88253 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Gm10226O88253 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC10.38□□□□□ -0.75
Gm10226O88253 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Gm10226O88253 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Gm10226O88253 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10226O88253 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Gm10226O88253 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10226O88253 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10226O88253 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10226O88253 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.37□□□□□ -0.75
Gm10226O88253 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Gm10226O88253 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10226O88253 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10226O88253 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10226O88253 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10226O88253 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10226O88253 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10226O88253 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Gm10226O88253 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10226O88253 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10226O88253 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10226O88253 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.37□□□□□ -0.75
Gm10226O88253 Gm14350-201ENSMUST00000116642 640 ntBASIC10.37□□□□□ -0.75
Gm10226O88253 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10226O88253 Gm14127-201ENSMUST00000117906 678 ntBASIC10.37□□□□□ -0.75
Gm10226O88253 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.37□□□□□ -0.75
Gm10226O88253 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 266.3 ms