Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ttc3O88196 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ttc3O88196 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.04□□□□□ -0.16
Ttc3O88196 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ttc3O88196 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ttc3O88196 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ttc3O88196 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.04□□□□□ -0.16
Ttc3O88196 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Gm13350-201ENSMUST00000120519 479 ntBASIC14.03□□□□□ -0.16
Ttc3O88196 Gm22121-201ENSMUST00000175148 54 ntBASIC14.03□□□□□ -0.16
Ttc3O88196 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.03□□□□□ -0.16
Ttc3O88196 Gm4768-201ENSMUST00000206199 686 ntBASIC14.03□□□□□ -0.16
Ttc3O88196 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ttc3O88196 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Ttc3O88196 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.03□□□□□ -0.16
Ttc3O88196 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.03□□□□□ -0.16
Ttc3O88196 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ttc3O88196 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ttc3O88196 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.03□□□□□ -0.16
Ttc3O88196 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Ttc3O88196 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.03□□□□□ -0.16
Ttc3O88196 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Ttc3O88196 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.03□□□□□ -0.16
Ttc3O88196 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.03□□□□□ -0.16
Ttc3O88196 Gm37259-201ENSMUST00000193903 849 ntBASIC14.03□□□□□ -0.16
Ttc3O88196 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Olfr284-202ENSMUST00000206647 966 ntBASIC14.03□□□□□ -0.16
Ttc3O88196 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Ttc3O88196 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc3O88196 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.02□□□□□ -0.16
Ttc3O88196 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ttc3O88196 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc3O88196 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc3O88196 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc3O88196 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc3O88196 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc3O88196 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc3O88196 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc3O88196 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ttc3O88196 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc3O88196 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ttc3O88196 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc3O88196 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Ttc3O88196 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc3O88196 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc3O88196 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ttc3O88196 Gm11591-201ENSMUST00000120063 702 ntBASIC14.02□□□□□ -0.17
Ttc3O88196 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.02□□□□□ -0.17
Ttc3O88196 Gm6334-201ENSMUST00000207083 228 ntBASIC14.02□□□□□ -0.17
Ttc3O88196 Gm45865-201ENSMUST00000211815 945 ntBASIC14.02□□□□□ -0.17
Ttc3O88196 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.02□□□□□ -0.17
Ttc3O88196 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.02□□□□□ -0.17
Ttc3O88196 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc3O88196 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Ttc3O88196 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.01□□□□□ -0.17
Ttc3O88196 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc3O88196 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc3O88196 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms