Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim1O70400 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim1O70400 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim1O70400 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.35□□□□□ -0.27
Pdlim1O70400 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim1O70400 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.35□□□□□ -0.27
Pdlim1O70400 Gm7063-201ENSMUST00000186840 981 ntBASIC13.35□□□□□ -0.27
Pdlim1O70400 Gm28911-201ENSMUST00000188837 117 ntBASIC13.35□□□□□ -0.27
Pdlim1O70400 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.35□□□□□ -0.27
Pdlim1O70400 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdlim1O70400 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdlim1O70400 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Pdlim1O70400 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim1O70400 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim1O70400 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim1O70400 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Gm15678-201ENSMUST00000117573 960 ntBASIC13.34□□□□□ -0.27
Pdlim1O70400 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.34□□□□□ -0.27
Pdlim1O70400 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.34□□□□□ -0.27
Pdlim1O70400 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.34□□□□□ -0.27
Pdlim1O70400 Gm6745-201ENSMUST00000199216 526 ntBASIC13.34□□□□□ -0.27
Pdlim1O70400 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.34□□□□□ -0.27
Pdlim1O70400 Gm9908-201ENSMUST00000211534 448 ntBASIC13.34□□□□□ -0.27
Pdlim1O70400 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pdlim1O70400 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim1O70400 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim1O70400 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim1O70400 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim1O70400 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pdlim1O70400 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Pdlim1O70400 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pdlim1O70400 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pdlim1O70400 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.33□□□□□ -0.28
Pdlim1O70400 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pdlim1O70400 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pdlim1O70400 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pdlim1O70400 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pdlim1O70400 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.33□□□□□ -0.28
Pdlim1O70400 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 Gm9794-201ENSMUST00000202370 423 ntBASIC13.33□□□□□ -0.28
Pdlim1O70400 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pdlim1O70400 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.33□□□□□ -0.28
Pdlim1O70400 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Pdlim1O70400 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim1O70400 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.32□□□□□ -0.28
Pdlim1O70400 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.32□□□□□ -0.28
Pdlim1O70400 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Pdlim1O70400 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim1O70400 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms