Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.64□□□□□ -0.71
Pde6dO55057 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC10.64□□□□□ -0.71
Pde6dO55057 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Pde6dO55057 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.64□□□□□ -0.71
Pde6dO55057 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.64□□□□□ -0.71
Pde6dO55057 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Pde6dO55057 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.64□□□□□ -0.71
Pde6dO55057 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Pde6dO55057 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pde6dO55057 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.63□□□□□ -0.71
Pde6dO55057 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.63□□□□□ -0.71
Pde6dO55057 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.63□□□□□ -0.71
Pde6dO55057 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Pde6dO55057 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Pde6dO55057 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.63□□□□□ -0.71
Pde6dO55057 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC10.63□□□□□ -0.71
Pde6dO55057 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC10.63□□□□□ -0.71
Pde6dO55057 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Pde6dO55057 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Pde6dO55057 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Pde6dO55057 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.63□□□□□ -0.71
Pde6dO55057 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pde6dO55057 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.63□□□□□ -0.71
Pde6dO55057 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Pde6dO55057 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.62□□□□□ -0.71
Pde6dO55057 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.62□□□□□ -0.71
Pde6dO55057 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.62□□□□□ -0.71
Pde6dO55057 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Pde6dO55057 AA543401-201ENSMUST00000164248 1269 ntBASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 177.2 ms