Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Limk2O54785 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Limk2O54785 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Limk2O54785 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Limk2O54785 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.71□□□□□ -0.21
Limk2O54785 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Limk2O54785 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.71□□□□□ -0.21
Limk2O54785 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Limk2O54785 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.71□□□□□ -0.21
Limk2O54785 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Limk2O54785 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Limk2O54785 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.71□□□□□ -0.21
Limk2O54785 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.71□□□□□ -0.21
Limk2O54785 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.71□□□□□ -0.21
Limk2O54785 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Limk2O54785 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Limk2O54785 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.71□□□□□ -0.21
Limk2O54785 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Limk2O54785 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Limk2O54785 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Limk2O54785 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Limk2O54785 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Limk2O54785 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Limk2O54785 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Limk2O54785 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.71□□□□□ -0.22
Limk2O54785 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Limk2O54785 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Limk2O54785 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Limk2O54785 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.7□□□□□ -0.22
Limk2O54785 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Limk2O54785 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Gm6244-201ENSMUST00000178732 841 ntBASIC13.7□□□□□ -0.22
Limk2O54785 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.7□□□□□ -0.22
Limk2O54785 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.7□□□□□ -0.22
Limk2O54785 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.7□□□□□ -0.22
Limk2O54785 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limk2O54785 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Limk2O54785 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Limk2O54785 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.69□□□□□ -0.22
Limk2O54785 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Limk2O54785 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Limk2O54785 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Limk2O54785 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Limk2O54785 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Limk2O54785 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Limk2O54785 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Limk2O54785 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Limk2O54785 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Limk2O54785 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.69□□□□□ -0.22
Limk2O54785 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Limk2O54785 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Limk2O54785 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Limk2O54785 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Limk2O54785 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.69□□□□□ -0.22
Limk2O54785 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.69□□□□□ -0.22
Limk2O54785 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.69□□□□□ -0.22
Limk2O54785 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.69□□□□□ -0.22
Limk2O54785 Gm12403-201ENSMUST00000121384 959 ntBASIC13.69□□□□□ -0.22
Limk2O54785 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.69□□□□□ -0.22
Limk2O54785 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.69□□□□□ -0.22
Limk2O54785 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.69□□□□□ -0.22
Limk2O54785 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms