Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.02□□□□□ -0.49
Lsm2O35900 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lsm2O35900 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lsm2O35900 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.02□□□□□ -0.49
Lsm2O35900 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lsm2O35900 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.02□□□□□ -0.49
Lsm2O35900 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Lsm2O35900 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lsm2O35900 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.01□□□□□ -0.49
Lsm2O35900 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.01□□□□□ -0.49
Lsm2O35900 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lsm2O35900 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Gm18195-201ENSMUST00000207604 706 ntBASIC12.01□□□□□ -0.49
Lsm2O35900 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lsm2O35900 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.01□□□□□ -0.49
Lsm2O35900 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Lsm2O35900 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lsm2O35900 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lsm2O35900 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lsm2O35900 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lsm2O35900 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm2O35900 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Lsm2O35900 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12□□□□□ -0.49
Lsm2O35900 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Lsm2O35900 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Lsm2O35900 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12□□□□□ -0.49
Lsm2O35900 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12□□□□□ -0.49
Lsm2O35900 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lsm2O35900 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lsm2O35900 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lsm2O35900 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12□□□□□ -0.49
Lsm2O35900 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Lsm2O35900 Gm2651-201ENSMUST00000203560 838 ntBASIC12□□□□□ -0.49
Lsm2O35900 Gm45841-201ENSMUST00000207700 164 ntBASIC12□□□□□ -0.49
Lsm2O35900 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Lsm2O35900 AC154806.6-201ENSMUST00000228192 202 ntBASIC12□□□□□ -0.49
Lsm2O35900 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lsm2O35900 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12□□□□□ -0.49
Lsm2O35900 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12□□□□□ -0.49
Lsm2O35900 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm2O35900 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms