Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Gm18737-201ENSMUST00000173594 937 ntBASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.31□□□□□ -0.44
Shisa8J3QNX5 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.31□□□□□ -0.44
Shisa8J3QNX5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Gm18733-201ENSMUST00000173950 856 ntBASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shisa8J3QNX5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms