Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Gm23270-201ENSMUST00000104055 131 ntBASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Mir877-201ENSMUST00000104738 85 ntBASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Gm12291-201ENSMUST00000121627 311 ntBASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Gm4366-201ENSMUST00000201488 1342 ntBASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcf11G3X9Z4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcf11G3X9Z4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Mir7070-201ENSMUST00000183657 86 ntBASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcf11G3X9Z4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pcf11G3X9Z4 Gm10434-201ENSMUST00000101158 471 ntBASIC20.08■□□□□ 0.8
Pcf11G3X9Z4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcf11G3X9Z4 Gm13492-201ENSMUST00000119772 665 ntBASIC20.08■□□□□ 0.8
Pcf11G3X9Z4 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Pcf11G3X9Z4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC20.08■□□□□ 0.8
Pcf11G3X9Z4 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pcf11G3X9Z4 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC20.08■□□□□ 0.8
Pcf11G3X9Z4 AC093022.1-201ENSMUST00000226949 1072 ntBASIC20.08■□□□□ 0.8
Pcf11G3X9Z4 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcf11G3X9Z4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pcf11G3X9Z4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Rn7s1-201ENSMUST00000174924 300 ntBASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Rn7s2-201ENSMUST00000175032 300 ntBASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Gm26461-201ENSMUST00000175064 290 ntBASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Gm22058-201ENSMUST00000083393 310 ntBASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcf11G3X9Z4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms