Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm26989-201ENSMUST00000182608 749 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Olfr692-202ENSMUST00000217827 1126 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Gm16071-201ENSMUST00000119589 793 ntBASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Gm14585-201ENSMUST00000120713 634 ntBASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Gm6644-201ENSMUST00000186507 951 ntBASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Gm17826-201ENSMUST00000189720 798 ntBASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Gm5100-201ENSMUST00000195631 589 ntBASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Gm5298-201ENSMUST00000201122 892 ntBASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Gm14832-201ENSMUST00000121289 322 ntBASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Gm45598-202ENSMUST00000210719 986 ntBASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a3E9PWQ3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 AY036118-201ENSMUST00000200021 923 ntBASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a3E9PWQ3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Gm37201-201ENSMUST00000191845 523 ntBASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms