Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.69□□□□□ -0.54
Dchs1E9PVD3 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Dchs1E9PVD3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Gm27552-201ENSMUST00000183351 62 ntBASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Gm27844-201ENSMUST00000183613 62 ntBASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Dchs1E9PVD3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Gm25214-201ENSMUST00000104573 129 ntBASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Dchs1E9PVD3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Dchs1E9PVD3 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.66□□□□□ -0.54
Dchs1E9PVD3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.66□□□□□ -0.54
Dchs1E9PVD3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Dchs1E9PVD3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Dchs1E9PVD3 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.66□□□□□ -0.54
Dchs1E9PVD3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Dchs1E9PVD3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Dchs1E9PVD3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Dchs1E9PVD3 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms