Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Gm3287-205ENSMUST00000228893 1332 ntBASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Crry-ps-201ENSMUST00000079090 1309 ntBASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Gm12058-201ENSMUST00000118614 437 ntBASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Gm8913-201ENSMUST00000209491 641 ntBASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 Mmp14-206ENSMUST00000225641 3238 ntBASIC18.63■□□□□ 0.57
Hfm1D3Z4R1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Gm42872-201ENSMUST00000200026 1967 ntBASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Ighv5-7-201ENSMUST00000192302 244 ntBASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Gm37835-201ENSMUST00000193305 361 ntBASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Gm26513-201ENSMUST00000181802 2489 ntBASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hfm1D3Z4R1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Gm10109-202ENSMUST00000206890 1211 ntBASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hfm1D3Z4R1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Gm16481-201ENSMUST00000119074 1227 ntBASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Gm13736-201ENSMUST00000119272 253 ntBASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Gm7467-201ENSMUST00000185173 652 ntBASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 AC126444.1-201ENSMUST00000225938 1768 ntBASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Gm7789-202ENSMUST00000211273 1400 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms