Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Gm12859-201ENSMUST00000117834 427 ntBASIC14.33□□□□□ -0.12
Rfx8D3YU81 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.33□□□□□ -0.12
Rfx8D3YU81 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.33□□□□□ -0.12
Rfx8D3YU81 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx8D3YU81 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Gm11524-201ENSMUST00000119349 807 ntBASIC14.32□□□□□ -0.12
Rfx8D3YU81 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Gm43094-201ENSMUST00000196549 921 ntBASIC14.32□□□□□ -0.12
Rfx8D3YU81 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Gm19078-201ENSMUST00000206311 727 ntBASIC14.32□□□□□ -0.12
Rfx8D3YU81 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.32□□□□□ -0.12
Rfx8D3YU81 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx8D3YU81 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.31□□□□□ -0.12
Rfx8D3YU81 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Gm12485-201ENSMUST00000119641 291 ntBASIC14.31□□□□□ -0.12
Rfx8D3YU81 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.31□□□□□ -0.12
Rfx8D3YU81 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Gm37917-201ENSMUST00000194711 392 ntBASIC14.31□□□□□ -0.12
Rfx8D3YU81 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Rfx8D3YU81 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.31□□□□□ -0.12
Rfx8D3YU81 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx8D3YU81 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx8D3YU81 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx8D3YU81 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx8D3YU81 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms