Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC6.93□□□□□ -1.3
Ubr4A2AN08 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC6.93□□□□□ -1.3
Ubr4A2AN08 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC6.93□□□□□ -1.3
Ubr4A2AN08 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ubr4A2AN08 AC122197.2-201ENSMUST00000219196 1635 ntBASIC6.92□□□□□ -1.3
Ubr4A2AN08 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm13445-201ENSMUST00000121664 307 ntBASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm5190-201ENSMUST00000192434 357 ntBASIC6.92□□□□□ -1.3
Ubr4A2AN08 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm16071-201ENSMUST00000119589 793 ntBASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm16210-201ENSMUST00000122161 610 ntBASIC6.92□□□□□ -1.3
Ubr4A2AN08 H2-Q3-201ENSMUST00000172583 608 ntBASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm24954-201ENSMUST00000178831 110 ntBASIC6.92□□□□□ -1.3
Ubr4A2AN08 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Mir8115-201ENSMUST00000184992 119 ntBASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm17826-201ENSMUST00000189720 798 ntBASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm22144-201ENSMUST00000157402 102 ntBASIC6.92□□□□□ -1.3
Ubr4A2AN08 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
Ubr4A2AN08 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC6.92□□□□□ -1.3
Ubr4A2AN08 AC159810.1-201ENSMUST00000214838 1480 ntBASIC6.92□□□□□ -1.3
Ubr4A2AN08 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ubr4A2AN08 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ubr4A2AN08 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ubr4A2AN08 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ubr4A2AN08 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ubr4A2AN08 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ubr4A2AN08 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ubr4A2AN08 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ubr4A2AN08 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ubr4A2AN08 Gm12516-201ENSMUST00000120819 385 ntBASIC6.91□□□□□ -1.3
Ubr4A2AN08 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ubr4A2AN08 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC6.91□□□□□ -1.3
Ubr4A2AN08 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ubr4A2AN08 Gm18256-201ENSMUST00000209087 907 ntBASIC6.91□□□□□ -1.3
Ubr4A2AN08 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms