Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pkd2l1A2A259 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Gm12585-201ENSMUST00000117307 290 ntBASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Gm33320-201ENSMUST00000192232 530 ntBASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pkd2l1A2A259 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Gm15393-201ENSMUST00000120499 219 ntBASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Gm10275-202ENSMUST00000168697 495 ntBASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Gm18624-201ENSMUST00000220966 658 ntBASIC13.24□□□□□ -0.29
Pkd2l1A2A259 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Gm10275-201ENSMUST00000092620 635 ntBASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pkd2l1A2A259 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pkd2l1A2A259 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pkd2l1A2A259 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pkd2l1A2A259 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pkd2l1A2A259 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms