Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Gm8410-201ENSMUST00000117225 605 ntBASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Gm12585-201ENSMUST00000117307 290 ntBASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Gm25144-201ENSMUST00000179561 110 ntBASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Gm25352-201ENSMUST00000179815 110 ntBASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Gm27622-201ENSMUST00000183779 60 ntBASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Gm7774-201ENSMUST00000200064 533 ntBASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Gm46209-201ENSMUST00000217912 553 ntBASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav12-1A0N8R1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Trav12-1A0N8R1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav12-1A0N8R1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav12-1A0N8R1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav12-1A0N8R1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Trav12-1A0N8R1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav12-1A0N8R1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav12-1A0N8R1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trav12-1A0N8R1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav12-1A0N8R1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav12-1A0N8R1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms