Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm16202-201ENSMUST00000117532 544 ntBASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28729A0A1B0GSW2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm6334-201ENSMUST00000207083 228 ntBASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28729A0A1B0GSW2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm13350-201ENSMUST00000120519 479 ntBASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Gm16479-201ENSMUST00000121706 932 ntBASIC13.11□□□□□ -0.31
Gm28729A0A1B0GSW2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms